Many thanks for all the replies.
I had hoped that the longer cranks would help with the knees, but as it's the other way around, not so much now. lol
I understand the info in the replies and it basically confirmed my thoughts, but in a clearer way.
The knee pain has been getting better and is limited to an ache in the knees now, rather than pain, during high stress and after the ride. Not a big deal but with existing knee problems from past training and running I wanted to get the best I can.
The other thing, of course, is that a lower saddle height and longer cranks will bring my knees higher to my torso when riding, if I am reading this right. That said I am quite badly overweight and my gut could create problems with the higher knee position.
I think this may be an adjustment left on the back burner for a while until my tendons strengthen up and my weight is at a more suitable number. lol
Thanks again for the help. Much appreciated.